Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | HMPREF3040_03838 | Not Available | Positive | 3670631 - 3671065 | 16895.3 |
| hypothetical protein | HMPREF3040_03839 | Not Available | Negative | 3671037 - 3671243 | 7923.48 |
| Ci repressor | HMPREF3040_03840 | Not Available | Negative | 3671591 - 3672283 | 25624.7 |
| Putative antirepressor cro | HMPREF3040_03841 | Not Available | Positive | 3672381 - 3672641 | 9736.61 |
| Hypothetical protein | HMPREF3040_03842 | Not Available | Positive | 3672634 - 3673185 | 20060.7 |
| Hypothetical protein | HMPREF3040_03843 | Not Available | Positive | 3673182 - 3673520 | 12183.4 |
| Replication protein | HMPREF3040_03844 | Not Available | Positive | 3673530 - 3674471 | 34984.9 |
| Hypothetical protein | HMPREF3040_03845 | Not Available | Positive | 3674468 - 3674956 | 18619.9 |
| Reca-mediated autopeptidases | HMPREF3040_03846 | Not Available | Positive | 3674956 - 3675282 | 11961.5 |
| Holliday junction resolvase | HMPREF3040_03847 | Not Available | Positive | 3675279 - 3675668 | 14203.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





