Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ICBECG2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321911 bp
Thymine Count
1312733 bp
Guanine Count
1335264 bp
Cytosine Count
1334342 bp
Genome Length
5304250 bp
Protein-coding Genes
4729 genes
Non-Coding Genes
319 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yopn/lcre/inve/mxic type iii secretion system gatekeeper | CSB64_003000 | Not Available | Positive | 651097 - 652242 | 43534.6 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | CSB64_003005 | Not Available | Positive | 652235 - 654295 | 76421.5 |
| flii/yscn family atpase | CSB64_003010 | Not Available | Positive | 654327 - 655619 | 47615.5 |
| type iii secretion protein | CSB64_003015 | Not Available | Positive | 655609 - 656067 | 18358.5 |
| type iii secretion protein | CSB64_003020 | Not Available | Positive | 656045 - 656920 | 33699.8 |
| yscq/hrcq family type iii secretion apparatus protein | CSB64_003025 | Not Available | Positive | 656920 - 657867 | 36096.2 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | CSB64_003030 | Not Available | Positive | 657857 - 658522 | 24540.5 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | CSB64_003035 | Not Available | Positive | 658532 - 658792 | 9430.85 |
| type iii secretion system export apparatus subunit sctt | CSB64_003040 | Not Available | Positive | 658794 - 659561 | 28103.7 |
| hypothetical protein | CSB64_003045 | Not Available | Positive | 659570 - 660136 | 21981.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




