Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ICBECG2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321911 bp
Thymine Count
1312733 bp
Guanine Count
1335264 bp
Cytosine Count
1334342 bp
Genome Length
5304250 bp
Protein-coding Genes
4729 genes
Non-Coding Genes
319 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colanic acid biosynthesis lipoprotein ypdi | CSB64_001115 | Not Available | Positive | 254229 - 254504 | 10077.4 |
| yfdy family protein | CSB64_001120 | Not Available | Negative | 254581 - 254823 | 8923.5 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | CSB64_001125 | Not Available | Positive | 255176 - 256096 | 35511.5 |
| membrane protein ypdk | CSB64_001130 | Not Available | Positive | 256452 - 256523 | 2704.57 |
| alanine transaminase | CSB64_001135 | Not Available | Negative | 256588 - 257826 | 46236.9 |
| two-component system sensor histidine kinase ypda | CSB64_001140 | Not Available | Positive | 258203 - 259900 | 62661.3 |
| two-component system response regulator ypdb | CSB64_001145 | Not Available | Positive | 259915 - 260649 | 28722.6 |
| helix-turn-helix transcriptional regulator | CSB64_001150 | Not Available | Positive | 260662 - 261519 | 32388.5 |
| phosphoenolpyruvate--protein phosphotransferase | CSB64_001155 | Not Available | Negative | 261522 - 264017 | 92216.3 |
| aminopeptidase | CSB64_001160 | Not Available | Negative | 264042 - 265079 | 37385.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




