Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ICBECG2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321911 bp
Thymine Count
1312733 bp
Guanine Count
1335264 bp
Cytosine Count
1334342 bp
Genome Length
5304250 bp
Protein-coding Genes
4729 genes
Non-Coding Genes
319 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease adapter clps | CSB64_023800 | Not Available | Positive | 4972976 - 4973296 | 12179.7 |
| atp-dependent clp protease atp-binding subunit clpa | CSB64_023805 | Not Available | Positive | 4973327 - 4975603 | 84211.9 |
| Trna-ser | Not Available | Not Available | Positive | 4976010 - 4976097 | Not Available |
| translation initiation factor if-1 | CSB64_023815 | Not Available | Negative | 4976351 - 4976569 | 8250.1 |
| leucyl/phenylalanyl-trna--protein transferase | CSB64_023820 | Not Available | Negative | 4976854 - 4977558 | 26581.0 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | CSB64_023825 | Not Available | Negative | 4977600 - 4979321 | 62884.1 |
| cysteine/glutathione abc transporter permease/atp-binding protein cydd | CSB64_023830 | Not Available | Negative | 4979322 - 4981088 | 65062.0 |
| thioredoxin-disulfide reductase | CSB64_023835 | Not Available | Negative | 4981211 - 4982176 | 34585.1 |
| efflux transporter outer membrane subunit | CSB64_023840 | Not Available | Negative | 4982687 - 4984057 | 51613.3 |
| macb family efflux pump subunit | CSB64_023845 | Not Available | Negative | 4984061 - 4986001 | 70411.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




