Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ICBECG2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321911 bp
Thymine Count
1312733 bp
Guanine Count
1335264 bp
Cytosine Count
1334342 bp
Genome Length
5304250 bp
Protein-coding Genes
4729 genes
Non-Coding Genes
319 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter substrate-binding protein | CSB64_020795 | Not Available | Positive | 4361589 - 4362581 | 35722.0 |
| d-xylose abc transporter atp-binding protein | CSB64_020800 | Not Available | Positive | 4362659 - 4364200 | 56419.8 |
| xylose abc transporter permease xylh | CSB64_020805 | Not Available | Positive | 4364178 - 4365359 | 41032.5 |
| dna-binding transcriptional regulator xylr | CSB64_020810 | Not Available | Positive | 4365437 - 4366615 | 44871.7 |
| protein bax | CSB64_020815 | Not Available | Negative | 4366723 - 4367547 | 30869.3 |
| alpha-amylase | CSB64_020820 | Not Available | Positive | 4367867 - 4369897 | 75907.6 |
| valine--pyruvate transaminase | CSB64_020825 | Not Available | Positive | 4370075 - 4371328 | 46683.9 |
| 4fe-4s binding protein | CSB64_020830 | Not Available | Negative | 4371367 - 4371840 | 17322.0 |
| iclr family transcriptional regulator yiaj | CSB64_020835 | Not Available | Negative | 4371942 - 4372790 | 31083.5 |
| 3-dehydro-l-gulonate 2-dehydrogenase | CSB64_020840 | Not Available | Positive | 4372991 - 4373989 | 36574.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




