Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ICBECG2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321911 bp
Thymine Count
1312733 bp
Guanine Count
1335264 bp
Cytosine Count
1334342 bp
Genome Length
5304250 bp
Protein-coding Genes
4729 genes
Non-Coding Genes
319 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system endodeoxyribonuclease toxin ralr | CSB64_015095 | Not Available | Positive | 3180036 - 3180185 | 5383.39 |
| duf1187 family protein | CSB64_015100 | Not Available | Positive | 3180223 - 3180411 | 7045.5 |
| excisionase xisr | CSB64_015105 | Not Available | Positive | 3180511 - 3180726 | 8456.25 |
| site-specific integrase | CSB64_015110 | Not Available | Positive | 3180728 - 3181963 | 47505.6 |
| trna 2-thiocytidine(32) synthetase ttca | CSB64_015115 | Not Available | Positive | 3182015 - 3182950 | 35517.0 |
| atp-dependent rna helicase dbpa | CSB64_015120 | Not Available | Negative | 3183079 - 3184452 | 49314.9 |
| zinc transporter zntb | CSB64_015125 | Not Available | Negative | 3184930 - 3185913 | 36614.3 |
| diguanylate cyclase dgcm | CSB64_015130 | Not Available | Positive | 3186168 - 3187400 | 46483.9 |
| dna endonuclease smra | CSB64_015135 | Not Available | Negative | 3187421 - 3187984 | 21541.8 |
| lysr family transcriptional regulator | CSB64_015140 | Not Available | Negative | 3188314 - 3189222 | 34045.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




