Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | ICBECG2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321911 bp
Thymine Count
1312733 bp
Guanine Count
1335264 bp
Cytosine Count
1334342 bp
Genome Length
5304250 bp
Protein-coding Genes
4729 genes
Non-Coding Genes
319 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter, nickel/metallophore periplasmic binding protein | CSB64_010500 | Not Available | Positive | 2198558 - 2200132 | 58814.2 |
| nickel abc transporter permease subunit nikb | CSB64_010505 | Not Available | Positive | 2200132 - 2201076 | 35237.3 |
| nickel abc transporter permease subunit nikc | CSB64_010510 | Not Available | Positive | 2201073 - 2201906 | 30363.8 |
| nickel import atp-binding protein nikd | CSB64_010515 | Not Available | Positive | 2201906 - 2202670 | 26814.2 |
| nickel import atp-binding protein nike | CSB64_010520 | Not Available | Positive | 2202667 - 2203473 | 29712.4 |
| nickel-responsive transcriptional regulator nikr | CSB64_010525 | Not Available | Positive | 2203478 - 2203879 | 15094.7 |
| type ii toxin-antitoxin system hicb family antitoxin | CSB64_010530 | Not Available | Negative | 2203999 - 2204358 | 13403.0 |
| abc-2 transporter permease | CSB64_010540 | Not Available | Negative | 2204703 - 2205827 | 41050.2 |
| ribosome-associated atpase/putative transporter rbba | CSB64_010545 | Not Available | Negative | 2205827 - 2208562 | 100711.0 |
| hlyd family secretion protein | CSB64_010550 | Not Available | Negative | 2208559 - 2209626 | 38834.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




