Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Portal protein | E5E93_00005 | Not Available | Positive | 1 - 1436 | 52281.1 |
| Trna-other; | Not Available | Not Available | Positive | 15 - 95 | Not Available |
| Trna-val; | Not Available | Not Available | Positive | 99 - 175 | Not Available |
| rrna,type:5s | Not Available | Not Available | Positive | 303 - 418 | 18.01 |
| Trna-glu; | Not Available | Not Available | Positive | 421 - 496 | Not Available |
| Attl | Not Available | Not Available | Positive | 466 - 478 | Not Available |
| Trna-pro; | Not Available | Not Available | Positive | 1167 - 1243 | Not Available |
| Capsid and scaffold protein | E5E93_00010 | Not Available | Positive | 1527 - 2420 | 33655.2 |
| rrna,type:16s | Not Available | Not Available | Positive | 13 - 1565 | 18.01 |
| Trna-ser; | Not Available | Not Available | Positive | 2101 - 2188 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Catheter-associated urinary tract infection | Causes | PMC2900259 |
| Cauti | Causes | PMC2900259 |
| Hemorrhagic colitis | Causes | PMC9731836 |
| Hemolytic and uremic syndrome (hus) | Causes | PMC9731836 |
| Infection in the urinary tract | Causes | PMC10160630 |
| Infection in other extraintestinal sites | Causes | PMC10160630 |
| Haemolytic uraemic syndrome | Causes | PMC11542628 |
| Hus | Causes | PMC11542628 |
| Sepsis | Causes | PMC12660362 |
| Bacteraemia | Causes | PMC12660362 |





