Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | E5E93_04030 | Not Available | Positive | 827511 - 828479 | 36341.3 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | E5E93_04035 | Not Available | Positive | 828479 - 830461 | 74238.0 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | E5E93_04040 | Not Available | Positive | 830458 - 831348 | 33113.6 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | E5E93_04045 | Not Available | Positive | 831348 - 833000 | 62546.9 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | E5E93_04050 | Not Available | Positive | 832997 - 833332 | 12192.7 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | E5E93_04055 | Not Available | Positive | 833332 - 833718 | 14068.0 |
| signal transduction protein pmrd | E5E93_04060 | Not Available | Negative | 833712 - 833978 | 9815.9 |
| o-succinylbenzoate--coa ligase | E5E93_04065 | Not Available | Negative | 834088 - 835443 | 50133.4 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | E5E93_04075 | Not Available | Negative | 836401 - 837258 | 31620.8 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | E5E93_04080 | Not Available | Negative | 837273 - 838031 | 27645.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





