Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase 1 subunit beta | E5E93_03925 | Not Available | Positive | 805924 - 807054 | 43519.6 |
| ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein yfae | E5E93_03930 | Not Available | Positive | 807054 - 807308 | 9222.19 |
| lipopolysaccharide kinase inaa | E5E93_03935 | Not Available | Negative | 807362 - 808012 | 25285.5 |
| mfs transporter | E5E93_03940 | Not Available | Negative | 808093 - 809283 | 42893.2 |
| lysr family transcriptional regulator | E5E93_03945 | Not Available | Positive | 809448 - 810326 | 32482.8 |
| glycerophosphodiester phosphodiesterase | E5E93_03950 | Not Available | Negative | 810371 - 811450 | 40991.7 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | E5E93_03960 | Not Available | Positive | 813087 - 814715 | 58961.7 |
| glycerol-3-phosphate dehydrogenase subunit glpb | E5E93_03965 | Not Available | Positive | 814705 - 815964 | 45417.9 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | E5E93_03970 | Not Available | Positive | 815961 - 817151 | 44152.6 |
| isncy family transposase | E5E93_03975 | Not Available | Positive | 817345 - 818244 | 34794.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





