Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinol dehydrogenase ferredoxin subunit naph | E5E93_03805 | Not Available | Negative | 764847 - 765710 | 31861.3 |
| ferredoxin-type protein napg | E5E93_03810 | Not Available | Negative | 765697 - 766392 | 24926.1 |
| periplasmic nitrate reductase subunit alpha | E5E93_03815 | Not Available | Negative | 766399 - 768885 | 93042.0 |
| chaperone napd | E5E93_03820 | Not Available | Negative | 768882 - 769145 | 9469.03 |
| ferredoxin-type protein napf | E5E93_03825 | Not Available | Negative | 769135 - 769629 | 18048.3 |
| ecotin | E5E93_03830 | Not Available | Positive | 770037 - 770525 | 18166.0 |
| malate dehydrogenase (quinone) | E5E93_03835 | Not Available | Negative | 770900 - 772546 | 60247.1 |
| microcin j25 efflux abc transporter yoji | E5E93_03840 | Not Available | Negative | 772764 - 774407 | 61556.4 |
| dna oxidative demethylase alkb | E5E93_03845 | Not Available | Negative | 774483 - 775133 | 24069.8 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | E5E93_03850 | Not Available | Negative | 775133 - 776197 | 39336.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





