Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate/nitrite response regulator protein narp | E5E93_03750 | Not Available | Positive | 756809 - 757456 | 23636.5 |
| cytochrome c-type biogenesis protein ccmh | E5E93_03755 | Not Available | Negative | 757491 - 758543 | 39122.3 |
| thiol:disulfide interchange protein dsbe | E5E93_03760 | Not Available | Negative | 758540 - 759097 | 20810.1 |
| cytochrome c maturation protein ccme | E5E93_03770 | Not Available | Negative | 761033 - 761512 | 17699.4 |
| heme exporter protein ccmd | E5E93_03775 | Not Available | Negative | 761509 - 761718 | 7761.59 |
| heme exporter protein ccmc | E5E93_03780 | Not Available | Negative | 761715 - 762452 | 27886.9 |
| heme exporter protein ccmb | E5E93_03785 | Not Available | Negative | 762494 - 763156 | 23620.3 |
| cytochrome c biogenesis heme-transporting atpase ccma | E5E93_03790 | Not Available | Negative | 763153 - 763770 | 22866.4 |
| cytochrome c-type protein napc | E5E93_03795 | Not Available | Negative | 763789 - 764391 | 23117.9 |
| nitrate reductase cytochrome c-type subunit | E5E93_03800 | Not Available | Negative | 764401 - 764850 | 16297.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





