Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane usher protein lpfc | E5E93_03675 | Not Available | Positive | 739779 - 742352 | 93888.1 |
| fimbrial protein | E5E93_03680 | Not Available | Positive | 742494 - 743423 | 32836.1 |
| long polar fimbrial protein lpfe | E5E93_03685 | Not Available | Positive | 743428 - 743958 | 18465.9 |
| kdo(2)-lipid a phosphoethanolamine 7''-transferase | E5E93_03690 | Not Available | Positive | 744213 - 745904 | 63807.0 |
| Trna-pro | Not Available | Not Available | Positive | 745996 - 746072 | Not Available |
| hypothetical protein | E5E93_03705 | Not Available | Negative | 748494 - 748721 | 8686.93 |
| dipeptide abc transporter permease dppb | E5E93_03710 | Not Available | Positive | 748739 - 749758 | 37511.4 |
| dipeptide abc transporter permease dppc | E5E93_03715 | Not Available | Positive | 749768 - 750670 | 32310.5 |
| dipeptide abc transporter atp-binding protein | E5E93_03720 | Not Available | Positive | 750681 - 751664 | 35816.6 |
| type i toxin-antitoxin system toxin ldr family protein | E5E93_03740 | Not Available | Positive | 754443 - 754550 | 3882.93 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





