Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | E5E93_03570 | Not Available | Positive | 719570 - 720892 | 49721.7 |
| xylulokinase | E5E93_03575 | Not Available | Positive | 720964 - 722418 | 52681.4 |
| hypothetical protein | E5E93_03580 | Not Available | Positive | 722587 - 722928 | 12553.0 |
| yiab family inner membrane protein | E5E93_03585 | Not Available | Positive | 722974 - 723411 | 16153.7 |
| hypothetical protein | E5E93_03595 | Not Available | Positive | 724624 - 724923 | 11324.8 |
| glycine--trna ligase subunit alpha | E5E93_03600 | Not Available | Positive | 725018 - 725929 | 34718.2 |
| glycine--trna ligase subunit beta | E5E93_03605 | Not Available | Positive | 725939 - 728008 | 76787.2 |
| type i toxin-antitoxin system toxin hoka | E5E93_03610 | Not Available | Positive | 728334 - 728486 | 5912.47 |
| rna chaperone/antiterminator cspa | E5E93_03615 | Not Available | Negative | 728674 - 728886 | 7403.66 |
| hth-type transcriptional regulator | E5E93_03620 | Not Available | Negative | 729167 - 729457 | 11033.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





