Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | E5E93_03455 | Not Available | Positive | 692010 - 693146 | 41990.8 |
| glutathione s-transferase | E5E93_03460 | Not Available | Positive | 693217 - 693825 | 22546.3 |
| l-seryl-trna(sec) selenium transferase | E5E93_03465 | Not Available | Positive | 693923 - 695314 | 50698.3 |
| selenocysteine-specific translation elongation factor | E5E93_03470 | Not Available | Positive | 695311 - 697155 | 68911.6 |
| l-threonine dehydrogenase | E5E93_03475 | Not Available | Positive | 697340 - 698497 | 40789.3 |
| aldehyde dehydrogenase | E5E93_03480 | Not Available | Positive | 698662 - 700200 | 56339.5 |
| hypothetical protein | E5E93_03485 | Not Available | Negative | 700419 - 700622 | 7680.78 |
| duf3302 domain-containing protein | E5E93_03490 | Not Available | Positive | 700745 - 701068 | 12404.2 |
| hlyd family secretion protein | E5E93_03495 | Not Available | Positive | 701074 - 702210 | 41801.6 |
| lysr family transcriptional regulator | E5E93_03500 | Not Available | Negative | 702207 - 703181 | 37285.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





