Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(18)-2'-o)-methyltransferase trmh | E5E93_03170 | Not Available | Negative | 633943 - 634632 | 25344.6 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | E5E93_03175 | Not Available | Negative | 634639 - 636747 | 79347.1 |
| dna-directed rna polymerase subunit omega | E5E93_03180 | Not Available | Negative | 636766 - 637041 | 10237.2 |
| guanylate kinase | E5E93_03185 | Not Available | Negative | 637096 - 637719 | 23594.1 |
| dna damage-inducible protein d | E5E93_03200 | Not Available | Negative | 640564 - 641388 | 31259.9 |
| yicc family protein | E5E93_03205 | Not Available | Negative | 641609 - 642472 | 33160.9 |
| ribonuclease ph | E5E93_03210 | Not Available | Positive | 642599 - 643315 | 25313.4 |
| orotate phosphoribosyltransferase | E5E93_03215 | Not Available | Positive | 643381 - 644022 | 23568.3 |
| rna-directed dna polymerase | E5E93_03220 | Not Available | Positive | 644320 - 645279 | 36241.0 |
| nucleoid occlusion factor slma | E5E93_03225 | Not Available | Negative | 645325 - 645921 | 22837.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





