Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ncs2 family permease | E5E93_02945 | Not Available | Positive | 591364 - 592698 | 46954.6 |
| duf1198 domain-containing protein | E5E93_02950 | Not Available | Positive | 592751 - 593203 | 17236.1 |
| dna-binding transcriptional regulator | E5E93_02955 | Not Available | Negative | 593319 - 593642 | 11639.2 |
| type ii toxin-antitoxin system rele/pare family toxin | E5E93_02960 | Not Available | Negative | 593626 - 593979 | 13456.2 |
| hypothetical protein | E5E93_02965 | Not Available | Positive | 593938 - 594129 | 7354.17 |
| purine ribonucleoside efflux pump nepi | E5E93_02970 | Not Available | Positive | 594213 - 595403 | 41887.6 |
| hypothetical protein | E5E93_02975 | Not Available | Negative | 595444 - 595695 | 9445.17 |
| lipoprotein nlpa | E5E93_02980 | Not Available | Positive | 595960 - 596778 | 29398.2 |
| sugar efflux transporter setb | E5E93_02990 | Not Available | Negative | 597820 - 599004 | 43466.0 |
| cytoplasmic protein | E5E93_02995 | Not Available | Negative | 599392 - 599532 | 5374.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





