Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ninf | E5E93_08855 | Not Available | Positive | 1845462 - 1845680 | 8513.5 |
| Hnh endonuclease | E5E93_08860 | Not Available | Positive | 1845643 - 1846150 | 19172.1 |
| Ninf protein | E5E93_08865 | Not Available | Positive | 1846143 - 1846214 | 2603.72 |
| Hypothetical protein | E5E93_08870 | Not Available | Positive | 1846204 - 1846596 | 15128.1 |
| Hypothetical protein | E5E93_08875 | Not Available | Positive | 1846589 - 1846879 | 10750.0 |
| Ninh protein | E5E93_08880 | Not Available | Positive | 1846876 - 1847238 | 14054.0 |
| Ninh protein | E5E93_08885 | Not Available | Positive | 1847235 - 1847423 | 6935.6 |
| Antitermination q | E5E93_08890 | Not Available | Positive | 1847420 - 1848043 | 22517.2 |
| hypothetical protein | E5E93_08895 | Not Available | Negative | 1848005 - 1848208 | 7766.66 |
| Hypothetical protein | E5E93_08900 | Not Available | Negative | 1848184 - 1848366 | 6539.19 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





