Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system antitoxin hicb | E5E93_02360 | Not Available | Positive | 477674 - 478090 | 15237.5 |
| abc transporter substrate-binding protein | E5E93_02370 | Not Available | Positive | 479821 - 480966 | 42297.3 |
| abc transporter atp-binding protein | E5E93_02375 | Not Available | Positive | 480984 - 481997 | 37033.9 |
| abc transporter permease | E5E93_02380 | Not Available | Positive | 481998 - 482939 | 34371.1 |
| abc transporter permease | E5E93_02385 | Not Available | Positive | 482929 - 483723 | 28693.5 |
| aminobutyraldehyde dehydrogenase | E5E93_02390 | Not Available | Positive | 483745 - 485169 | 50858.9 |
| stress response membrane protein yncl | E5E93_02395 | Not Available | Negative | 485266 - 485361 | 3490.44 |
| ghot/ortt family toxin | E5E93_02400 | Not Available | Positive | 485556 - 485729 | 6646.44 |
| duf2526 domain-containing protein | E5E93_02405 | Not Available | Positive | 485815 - 486048 | 8800.41 |
| dmt family transporter | E5E93_02410 | Not Available | Negative | 486049 - 486498 | 15824.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





