Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multifunctional d-malate/3-isopropylmalate/tartarate dehydrogenase | E5E93_02300 | Not Available | Negative | 467789 - 468874 | 40317.2 |
| lysr family transcriptional regulator | E5E93_02305 | Not Available | Positive | 468977 - 469900 | 34676.9 |
| leucine efflux protein leue | E5E93_02310 | Not Available | Positive | 470027 - 470665 | 23259.0 |
| duf1971 domain-containing protein | E5E93_02315 | Not Available | Positive | 470838 - 471197 | 13612.2 |
| duf1869 domain-containing protein | E5E93_02320 | Not Available | Positive | 471201 - 471389 | 6789.13 |
| is200/is605 family transposase | E5E93_02325 | Not Available | Negative | 471405 - 471836 | 16515.0 |
| transposase | E5E93_02330 | Not Available | Positive | 471844 - 473052 | 45746.0 |
| helix-turn-helix domain-containing protein | E5E93_02340 | Not Available | Positive | 474360 - 474896 | 19712.4 |
| 23s rrna 5-hydroxycytidine c2501 synthase | E5E93_02345 | Not Available | Positive | 474969 - 476930 | 72795.0 |
| duf2554 family protein | E5E93_02350 | Not Available | Negative | 477022 - 477252 | 8709.32 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





