Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yoah family protein | E5E93_02245 | Not Available | Positive | 455831 - 456010 | 6554.7 |
| duf1889 family protein | E5E93_02250 | Not Available | Negative | 456130 - 456489 | 13232.0 |
| rida family protein | E5E93_02255 | Not Available | Negative | 456851 - 457195 | 12493.9 |
| atp-dependent dna helicase | E5E93_02260 | Not Available | Positive | 457327 - 459237 | 70365.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | E5E93_02265 | Not Available | Positive | 459295 - 459990 | 25198.3 |
| slp family lipoprotein yeay | E5E93_02270 | Not Available | Positive | 460030 - 460611 | 20922.4 |
| ribonuclease d | E5E93_02280 | Not Available | Positive | 462582 - 463697 | 42139.8 |
| carnitine monooxygenase subunit yeax | E5E93_02285 | Not Available | Negative | 463751 - 464716 | 35650.2 |
| carnitine monooxygenase subunit yeaw | E5E93_02290 | Not Available | Negative | 464772 - 465896 | 42563.0 |
| bcct family transporter | E5E93_02295 | Not Available | Negative | 465928 - 467373 | 52884.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





