Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antiterminator/rna stability regulator cspe | E5E93_02185 | Not Available | Positive | 443125 - 443334 | 7402.76 |
| manganese efflux pump mntp | E5E93_02195 | Not Available | Negative | 444307 - 444873 | 20118.3 |
| duf986 domain-containing protein | E5E93_02200 | Not Available | Negative | 445302 - 445760 | 17616.4 |
| pts mannose transporter subunit iid | E5E93_02205 | Not Available | Negative | 445815 - 446666 | 30849.3 |
| pts mannose/fructose/sorbose transporter subunit iic | E5E93_02210 | Not Available | Negative | 446679 - 447479 | 27637.6 |
| pts mannose transporter subunit iiab | E5E93_02215 | Not Available | Negative | 447542 - 448513 | 35049.6 |
| terc family protein | E5E93_02220 | Not Available | Positive | 448976 - 450532 | 56531.5 |
| l-serine ammonia-lyase | E5E93_02230 | Not Available | Negative | 452266 - 453630 | 48856.4 |
| coa pyrophosphatase | E5E93_02235 | Not Available | Negative | 453814 - 454392 | 21464.9 |
| aminodeoxychorismate synthase component 1 | E5E93_02240 | Not Available | Negative | 454396 - 455757 | 51016.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





