Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebb family permuted papain-like enzyme | E5E93_01980 | Not Available | Negative | 403710 - 404312 | 22663.1 |
| hypothetical protein | E5E93_01985 | Not Available | Positive | 404383 - 404448 | 2680.43 |
| holliday junction branch migration protein ruva | E5E93_01990 | Not Available | Positive | 404587 - 405198 | 22112.1 |
| holliday junction branch migration dna helicase ruvb | E5E93_01995 | Not Available | Positive | 405207 - 406217 | 37176.0 |
| zinc abc transporter permease subunit znub | E5E93_02000 | Not Available | Negative | 406361 - 407146 | 27778.5 |
| zinc abc transporter atp-binding protein znuc | E5E93_02005 | Not Available | Negative | 407143 - 407898 | 27869.3 |
| zinc abc transporter substrate-binding protein znua | E5E93_02010 | Not Available | Positive | 407977 - 408909 | 33851.3 |
| murein dd-endopeptidase mepm | E5E93_02015 | Not Available | Positive | 408925 - 410247 | 49060.6 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | E5E93_02020 | Not Available | Positive | 410367 - 411338 | 37412.5 |
| pyruvate kinase ii | E5E93_02025 | Not Available | Negative | 411469 - 412911 | 51360.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





