Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2594 family protein | E5E93_01720 | Not Available | Negative | 355292 - 355516 | 8239.04 |
| hypothetical protein | E5E93_01725 | Not Available | Negative | 355503 - 355679 | 6767.46 |
| two-component system response regulator uvry | E5E93_01730 | Not Available | Positive | 355975 - 356631 | 23894.1 |
| excinuclease abc subunit uvrc | E5E93_01735 | Not Available | Positive | 356628 - 358460 | 68192.0 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | E5E93_01740 | Not Available | Positive | 358517 - 359065 | 20701.7 |
| Trna-gly | Not Available | Not Available | Positive | 359217 - 359292 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 359347 - 359420 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 359433 - 359519 | Not Available |
| upf0149 family protein yeca | E5E93_01760 | Not Available | Positive | 359715 - 360380 | 25040.5 |
| tyrosine transporter tyrp | E5E93_01765 | Not Available | Negative | 360442 - 361653 | 42821.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





