Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellum-specific atp synthase flii | E5E93_01610 | Not Available | Negative | 335461 - 336834 | 49332.6 |
| flagellar assembly protein flih | E5E93_01615 | Not Available | Negative | 336834 - 337520 | 25098.7 |
| flagellar motor switch protein flig | E5E93_01620 | Not Available | Negative | 337513 - 338508 | 36778.2 |
| flagellar basal body m-ring protein flif | E5E93_01625 | Not Available | Negative | 338501 - 340159 | 60534.6 |
| flagellar hook-basal body complex protein flie | E5E93_01630 | Not Available | Positive | 340374 - 340688 | 11113.4 |
| sos response-associated peptidase | E5E93_01640 | Not Available | Negative | 341081 - 341749 | 25073.7 |
| sulfurtransferase-like selenium metabolism protein yedf | E5E93_01645 | Not Available | Negative | 341856 - 342089 | 8671.57 |
| selenium metabolism membrane protein yede/fdht | E5E93_01650 | Not Available | Negative | 342086 - 343291 | 44461.5 |
| lipoprotein | E5E93_01655 | Not Available | Positive | 343478 - 343891 | 15002.1 |
| alpha-amylase | E5E93_01660 | Not Available | Negative | 343925 - 345412 | 56566.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





