Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein dsrb | E5E93_01555 | Not Available | Positive | 328510 - 328752 | 9071.8 |
| transcriptional regulator rcsa | E5E93_01560 | Not Available | Negative | 328796 - 329419 | 23541.8 |
| flagellar type iii secretion system protein flir | E5E93_01565 | Not Available | Negative | 329709 - 330494 | 28535.4 |
| flagellar biosynthesis protein fliq | E5E93_01570 | Not Available | Negative | 330502 - 330771 | 9632.54 |
| flagellar type iii secretion system protein flio | E5E93_01580 | Not Available | Negative | 331519 - 331884 | 12670.6 |
| flagellar motor switch protein flin | E5E93_01585 | Not Available | Negative | 331887 - 332300 | 14811.7 |
| flagellar motor switch protein flim | E5E93_01590 | Not Available | Negative | 332297 - 333301 | 37879.5 |
| flagellar basal body-associated protein flil | E5E93_01595 | Not Available | Negative | 333306 - 333770 | 17221.8 |
| flagellar hook length control protein flik | E5E93_01600 | Not Available | Negative | 333875 - 335002 | 39198.9 |
| flagella biosynthesis chaperone flij | E5E93_01605 | Not Available | Negative | 334999 - 335442 | 17325.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





