Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | E5E93_01505 | Not Available | Positive | 319904 - 320269 | 13838.9 |
| phosphohydrolase | E5E93_01510 | Not Available | Positive | 320309 - 321004 | 25957.8 |
| dna cytosine methyltransferase | E5E93_01515 | Not Available | Positive | 321071 - 322489 | 53469.7 |
| very short patch repair endonuclease | E5E93_01520 | Not Available | Positive | 322470 - 322940 | 18016.6 |
| drug/metabolite exporter yeda | E5E93_01525 | Not Available | Negative | 322929 - 323849 | 32196.0 |
| duf808 domain-containing protein | E5E93_01530 | Not Available | Positive | 324022 - 324939 | 32180.8 |
| duf2158 domain-containing protein | E5E93_01535 | Not Available | Positive | 325018 - 325200 | 6678.85 |
| cellulose biosynthesis regulator yedq | E5E93_01540 | Not Available | Positive | 325370 - 327064 | 64286.5 |
| mannosyl-3-phosphoglycerate phosphatase-related protein | E5E93_01545 | Not Available | Negative | 327061 - 327876 | 30486.1 |
| peroxide/acid resistance protein yodd | E5E93_01550 | Not Available | Negative | 328174 - 328401 | 8579.66 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





