Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphate phosphatase | E5E93_01350 | Not Available | Negative | 284276 - 285097 | 29774.7 |
| bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | E5E93_01355 | Not Available | Negative | 285188 - 285556 | 13620.2 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | E5E93_01360 | Not Available | Positive | 285661 - 286278 | 22194.7 |
| dna-binding transcriptional activator ttdr | E5E93_01365 | Not Available | Negative | 286291 - 287223 | 35316.6 |
| l(+)-tartrate dehydratase subunit alpha | E5E93_01370 | Not Available | Positive | 287430 - 288341 | 32721.5 |
| l(+)-tartrate dehydratase subunit beta | E5E93_01375 | Not Available | Positive | 288338 - 288943 | 22680.8 |
| anion permease | E5E93_01380 | Not Available | Positive | 288991 - 290454 | 52910.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | E5E93_01385 | Not Available | Negative | 290497 - 291510 | 36009.5 |
| 30s ribosomal protein s21 | E5E93_01390 | Not Available | Positive | 291747 - 291962 | 8500.42 |
| dna primase | E5E93_01395 | Not Available | Positive | 292074 - 293819 | 65568.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





