Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| accessory factor ubik family protein | E5E93_01295 | Not Available | Positive | 272390 - 272689 | 11415.8 |
| cell surface composition regulator glgs | E5E93_01300 | Not Available | Negative | 272724 - 272924 | 7922.34 |
| duf1449 family protein | E5E93_01305 | Not Available | Positive | 273193 - 273822 | 23054.5 |
| flotillin family protein | E5E93_01310 | Not Available | Positive | 273849 - 275510 | 60688.2 |
| type i toxin-antitoxin system ibs family toxin | E5E93_01315 | Not Available | Positive | 275749 - 275808 | 2150.99 |
| type i toxin-antitoxin system toxin ibse | E5E93_01320 | Not Available | Positive | 276125 - 276184 | 2241.07 |
| bifunctional | E5E93_01330 | Not Available | Negative | 277786 - 280626 | 108397.0 |
| inorganic triphosphatase | E5E93_01335 | Not Available | Negative | 280649 - 281950 | 48467.8 |
| sh3 domain-containing protein | E5E93_01340 | Not Available | Positive | 282192 - 282812 | 23077.7 |
| fused trna nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase cca | E5E93_01345 | Not Available | Positive | 282876 - 284114 | 46513.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





