Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic-amp phosphodiesterase | E5E93_01250 | Not Available | Negative | 263556 - 264383 | 30939.7 |
| duf1249 family protein | E5E93_01255 | Not Available | Negative | 264408 - 264830 | 16530.9 |
| adp-ribose diphosphatase | E5E93_01260 | Not Available | Negative | 264831 - 265460 | 23726.2 |
| outer membrane channel protein tolc | E5E93_01265 | Not Available | Positive | 265665 - 267146 | 53743.7 |
| duf1190 family protein | E5E93_01270 | Not Available | Positive | 267294 - 267965 | 23480.7 |
| glutathionylspermidine synthase family protein | E5E93_01275 | Not Available | Positive | 267971 - 269131 | 45028.4 |
| 4,5-dopa dioxygenase extradiol | E5E93_01280 | Not Available | Negative | 269169 - 269984 | 29846.9 |
| zinc transporter zupt | E5E93_01285 | Not Available | Positive | 270100 - 270873 | 26486.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 271762 - 271887 | Not Available |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | E5E93_01290 | Not Available | Negative | 271363 - 272016 | 23354.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





