Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph:quinone oxidoreductase mdab | E5E93_01200 | Not Available | Positive | 252827 - 253408 | 21892.1 |
| antibiotic biosynthesis monooxygenase | E5E93_01205 | Not Available | Positive | 253439 - 253753 | 11533.1 |
| murr/rpir family transcriptional regulator | E5E93_01210 | Not Available | Negative | 253798 - 254685 | 32240.3 |
| iron-siderophore abc transporter substrate-binding protein | E5E93_01215 | Not Available | Negative | 254682 - 255629 | 34461.7 |
| iron abc transporter permease | E5E93_01220 | Not Available | Negative | 255640 - 256677 | 36526.5 |
| iron abc transporter permease | E5E93_01225 | Not Available | Negative | 256686 - 257669 | 33858.1 |
| abc transporter atp-binding protein | E5E93_01230 | Not Available | Negative | 257666 - 258475 | 29932.5 |
| tonb-dependent siderophore receptor | E5E93_01235 | Not Available | Positive | 258849 - 260990 | 78583.4 |
| dna topoisomerase iv subunit b | E5E93_01240 | Not Available | Negative | 261054 - 262946 | 70247.9 |
| esterase yqia | E5E93_01245 | Not Available | Negative | 262975 - 263556 | 21642.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





