Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein yqhh | E5E93_01145 | Not Available | Positive | 239805 - 240062 | 9513.58 |
| ygiq family radical sam protein | E5E93_01150 | Not Available | Negative | 240105 - 242324 | 83552.6 |
| cell division protein ftsp | E5E93_01155 | Not Available | Negative | 242435 - 243847 | 51834.1 |
| 1-acylglycerol-3-phosphate o-acyltransferase | E5E93_01160 | Not Available | Negative | 243922 - 244659 | 27424.7 |
| dna topoisomerase 4 subunit a | E5E93_01165 | Not Available | Negative | 244893 - 247151 | 83836.3 |
| transcriptional regulator | E5E93_01175 | Not Available | Negative | 249006 - 249488 | 17842.2 |
| ob fold stress tolerance protein ygiw | E5E93_01180 | Not Available | Negative | 249541 - 249933 | 14011.5 |
| two-component system response regulator qseb | E5E93_01185 | Not Available | Positive | 250085 - 250744 | 24747.2 |
| two-component system sensor histidine kinase qsec | E5E93_01190 | Not Available | Positive | 250741 - 252090 | 50332.8 |
| duf2645 family protein | E5E93_01195 | Not Available | Negative | 252136 - 252468 | 13168.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





