Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation nickel metallochaperone hypa | E5E93_01045 | Not Available | Negative | 221152 - 221493 | 12698.1 |
| hydrogenase-2 assembly chaperone | E5E93_01050 | Not Available | Negative | 221486 - 221974 | 17964.7 |
| hyad/hybd family hydrogenase maturation endopeptidase | E5E93_01055 | Not Available | Negative | 221967 - 222461 | 17766.9 |
| hydrogenase 2 large subunit | E5E93_01060 | Not Available | Negative | 222461 - 224164 | 62494.6 |
| ni/fe-hydrogenase cytochrome b subunit | E5E93_01065 | Not Available | Negative | 224161 - 225339 | 43604.6 |
| hydrogenase 2 operon protein hyba | E5E93_01070 | Not Available | Negative | 225329 - 226315 | 36005.0 |
| hydrogenase 2 small subunit | E5E93_01075 | Not Available | Negative | 226318 - 227436 | 39654.3 |
| duf2623 domain-containing protein | E5E93_01080 | Not Available | Negative | 227625 - 227912 | 10946.1 |
| dienelactone hydrolase family protein | E5E93_01085 | Not Available | Negative | 228031 - 228918 | 32584.6 |
| l-glyceraldehyde 3-phosphate reductase | E5E93_01090 | Not Available | Positive | 229075 - 230115 | 38833.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





