Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5E93_23800 | Not Available | Positive | 4836569 - 4836874 | 11602.2 |
| recombinase | E5E93_23805 | Not Available | Positive | 4837903 - 4838610 | 26657.3 |
| single-stranded dna-binding protein | E5E93_23810 | Not Available | Positive | 4838611 - 4839126 | 19155.5 |
| duf2856 family protein | E5E93_23820 | Not Available | Positive | 4839699 - 4839992 | 11603.7 |
| duf2737 family protein | E5E93_23825 | Not Available | Positive | 4840003 - 4840167 | 6316.87 |
| rop family plasmid primer rna-binding protein | E5E93_23840 | Not Available | Negative | 4841250 - 4841432 | 6848.13 |
| pbsx family phage terminase large subunit | E5E93_23850 | Not Available | Positive | 4843071 - 4844486 | 53032.0 |
| portal protein | E5E93_23855 | Not Available | Positive | 4844488 - 4845526 | 39903.6 |
| rop family plasmid primer rna-binding protein | E5E93_23860 | Not Available | Positive | 4846111 - 4846277 | 6386.63 |
| Trna-glu | Not Available | Not Available | Positive | 4846698 - 4846773 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





