Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is6 family transposase | E5E93_23460 | Not Available | Negative | 4796544 - 4796789 | 10373.4 |
| hypothetical protein | E5E93_23465 | Not Available | Positive | 4796760 - 4797104 | 12349.6 |
| hypothetical protein | E5E93_23470 | Not Available | Positive | 4797408 - 4797677 | 10234.1 |
| type ii toxin-antitoxin system rele/pare family toxin | E5E93_23475 | Not Available | Positive | 4797674 - 4797955 | 10867.2 |
| helix-turn-helix domain-containing protein | E5E93_23495 | Not Available | Positive | 4799880 - 4800001 | 4789.94 |
| hypothetical protein | E5E93_23580 | Not Available | Positive | 4813282 - 4813572 | 11021.6 |
| recombination protein ninb | E5E93_23585 | Not Available | Positive | 4813646 - 4814086 | 16620.9 |
| s-adenosylmethionine-binding protein | E5E93_23590 | Not Available | Positive | 4814083 - 4814673 | 22390.2 |
| protein nind | E5E93_23595 | Not Available | Positive | 4814670 - 4814843 | 6896.09 |
| nine family protein | E5E93_23600 | Not Available | Positive | 4814810 - 4814986 | 7171.72 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





