Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body rod protein flgf | E5E93_23345 | Not Available | Positive | 4769519 - 4770256 | 25882.3 |
| flagellar basal-body rod protein flgg | E5E93_23350 | Not Available | Positive | 4770335 - 4771120 | 27507.3 |
| flagellar basal body l-ring protein flgh | E5E93_23355 | Not Available | Positive | 4771323 - 4771988 | 24058.2 |
| flagellar basal body p-ring protein flgi | E5E93_23360 | Not Available | Positive | 4772003 - 4773103 | 37673.9 |
| rod-binding protein | E5E93_23365 | Not Available | Positive | 4773103 - 4773402 | 11048.3 |
| type 1 fimbriae regulatory protein fime | E5E93_23370 | Not Available | Negative | 4773882 - 4774478 | 23102.7 |
| type 1 fimbriae regulatory protein fimb | E5E93_23375 | Not Available | Negative | 4774991 - 4775560 | 21635.2 |
| n-acetylneuraminic acid outer membrane channel nanc | E5E93_23380 | Not Available | Positive | 4777017 - 4777733 | 27921.5 |
| dna sulfur modification protein dndb | E5E93_23395 | Not Available | Positive | 4780338 - 4781423 | 40774.9 |
| dna phosphorothioation system sulfurtransferase dndc | E5E93_23400 | Not Available | Positive | 4781420 - 4783054 | 62517.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





