Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is6-like element is26 family transposase | E5E93_22985 | Not Available | Negative | 4701398 - 4702102 | 27896.9 |
| ant(3'')-ia family aminoglycoside nucleotidyltransferase aada5 | E5E93_22990 | Not Available | Negative | 4702304 - 4703092 | 29043.8 |
| trimethoprim-resistant dihydrofolate reductase dfra17 | E5E93_22995 | Not Available | Negative | 4703223 - 4703696 | 17560.2 |
| class 1 integron integrase inti1 | E5E93_23000 | Not Available | Positive | 4703854 - 4704867 | 38383.4 |
| duf3330 domain-containing protein | E5E93_23010 | Not Available | Positive | 4705070 - 4705420 | 12550.7 |
| recombinase family protein | E5E93_23015 | Not Available | Positive | 4705596 - 4706156 | 21288.5 |
| tn3-like element tnas1 family transposase | E5E93_23020 | Not Available | Positive | 4706160 - 4709126 | 111673.0 |
| type ii toxin-antitoxin system rele/pare family toxin | E5E93_23050 | Not Available | Negative | 4711811 - 4712092 | 10894.2 |
| toxin-antitoxin system protein | E5E93_23055 | Not Available | Negative | 4712089 - 4712195 | 3792.43 |
| fimbrial protein | E5E93_23060 | Not Available | Negative | 4712196 - 4712430 | 8494.01 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





