Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E5E93_22425 | Not Available | Negative | 4621078 - 4621620 | 19862.0 |
| duf494 domain-containing protein | E5E93_22430 | Not Available | Negative | 4621649 - 4622122 | 18484.2 |
| dna-protecting protein dpra | E5E93_22435 | Not Available | Negative | 4622094 - 4623218 | 40980.3 |
| peptide deformylase | E5E93_22440 | Not Available | Positive | 4623348 - 4623857 | 19329.6 |
| methionyl-trna formyltransferase | E5E93_22445 | Not Available | Positive | 4623872 - 4624819 | 34142.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | E5E93_22450 | Not Available | Positive | 4624865 - 4626154 | 48380.3 |
| trk system potassium transporter trka | E5E93_22455 | Not Available | Positive | 4626176 - 4627552 | 50370.8 |
| large-conductance mechanosensitive channel protein mscl | E5E93_22460 | Not Available | Positive | 4627682 - 4628092 | 14957.7 |
| alternative ribosome-rescue factor a | E5E93_22465 | Not Available | Negative | 4628089 - 4628307 | 8177.86 |
| zn(2+)-responsive transcriptional regulator | E5E93_22470 | Not Available | Negative | 4628363 - 4628788 | 16180.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





