Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine 5'-nucleotidase | E5E93_22375 | Not Available | Positive | 4612494 - 4613171 | 25261.0 |
| peptide chain release factor 3 | E5E93_22380 | Not Available | Positive | 4613262 - 4614851 | 59577.5 |
| molecular chaperone osmy | E5E93_22385 | Not Available | Positive | 4615244 - 4615849 | 21065.9 |
| duf1328 domain-containing protein | E5E93_22390 | Not Available | Positive | 4615977 - 4616138 | 5536.27 |
| patatin family protein | E5E93_22395 | Not Available | Positive | 4616260 - 4617333 | 39834.1 |
| metal-dependent hydrolase | E5E93_22400 | Not Available | Positive | 4617330 - 4618109 | 28954.7 |
| gamma carbonic anhydrase family protein | E5E93_22405 | Not Available | Positive | 4618894 - 4619448 | 20246.3 |
| duf1488 domain-containing protein | E5E93_22410 | Not Available | Negative | 4619424 - 4619681 | 10007.5 |
| shikimate dehydrogenase | E5E93_22415 | Not Available | Negative | 4619678 - 4620496 | 29427.4 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | E5E93_22420 | Not Available | Negative | 4620501 - 4621073 | 20641.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





