Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpn family recombination-promoting nuclease/putative transposase | E5E93_22165 | Not Available | Positive | 4568589 - 4569533 | 36851.5 |
| plp-dependent aminotransferase family protein | E5E93_22170 | Not Available | Negative | 4569776 - 4571188 | 53149.8 |
| duf1127 domain-containing protein | E5E93_22175 | Not Available | Positive | 4571365 - 4571553 | 7855.53 |
| endoribonuclease syme | E5E93_22180 | Not Available | Negative | 4571573 - 4571911 | 12332.8 |
| type i restriction endonuclease subunit r | E5E93_22185 | Not Available | Negative | 4572126 - 4575389 | 124940.0 |
| type i restriction-modification system subunit m | E5E93_22195 | Not Available | Negative | 4576858 - 4578477 | 60621.9 |
| restriction endonuclease | E5E93_22200 | Not Available | Negative | 4578541 - 4579707 | 44245.1 |
| brnt family toxin | E5E93_22205 | Not Available | Positive | 4579904 - 4580191 | 11143.2 |
| toxin-antitoxin system, antitoxin component | E5E93_22210 | Not Available | Positive | 4580178 - 4580480 | 11532.6 |
| gtpase | E5E93_22215 | Not Available | Negative | 4580514 - 4581470 | 35694.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





