Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-aspartyl-peptidase | E5E93_22095 | Not Available | Negative | 4549589 - 4550761 | 41086.3 |
| hypothetical protein | E5E93_22100 | Not Available | Negative | 4550774 - 4551235 | 16194.5 |
| rna 2'-phosphotransferase | E5E93_22110 | Not Available | Positive | 4552166 - 4552717 | 20288.4 |
| hypothetical protein | E5E93_22115 | Not Available | Negative | 4552874 - 4558114 | 188196.0 |
| mfs transporter | E5E93_22120 | Not Available | Negative | 4558325 - 4559503 | 41277.0 |
| hypothetical protein | E5E93_22125 | Not Available | Negative | 4559571 - 4560413 | 31475.6 |
| duf3343 domain-containing protein | E5E93_22140 | Not Available | Negative | 4563260 - 4563526 | 9891.92 |
| hypothetical protein | E5E93_22145 | Not Available | Negative | 4563523 - 4564290 | 27174.7 |
| 2-hydroxyacyl-coa dehydratase subunit d | E5E93_22150 | Not Available | Negative | 4564300 - 4565451 | 42756.3 |
| multidrug efflux mfs transporter mdtm | E5E93_22160 | Not Available | Negative | 4566889 - 4568076 | 42790.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





