Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbriae minor subunit fimg | E5E93_22045 | Not Available | Positive | 4539518 - 4540021 | 17318.3 |
| type 1 fimbriae d-mannose specific adhesin fimh | E5E93_22050 | Not Available | Positive | 4540041 - 4540943 | 31459.2 |
| gluconate permease gntp | E5E93_22055 | Not Available | Negative | 4541186 - 4542529 | 47141.0 |
| mannonate dehydratase | E5E93_22060 | Not Available | Positive | 4542869 - 4544053 | 44796.5 |
| fructuronate reductase | E5E93_22065 | Not Available | Positive | 4544134 - 4545594 | 53675.3 |
| uxu operon transcriptional regulator | E5E93_22070 | Not Available | Positive | 4545809 - 4546582 | 29309.9 |
| duf2686 family protein | E5E93_22075 | Not Available | Negative | 4546723 - 4547553 | 30721.7 |
| irad leader peptide | E5E93_22080 | Not Available | Positive | 4548148 - 4548231 | 3016.48 |
| anti-adapter protein irad | E5E93_22085 | Not Available | Positive | 4548228 - 4548620 | 14757.8 |
| hypochlorite stress dna-binding transcriptional regulator hypt | E5E93_22090 | Not Available | Negative | 4548613 - 4549524 | 34712.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





