Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose abc transporter atp-binding protein rbsa | E5E93_21995 | Not Available | Negative | 4528755 - 4530260 | 55045.0 |
| d-ribose pyranase | E5E93_22000 | Not Available | Negative | 4530268 - 4530687 | 15310.5 |
| low affinity potassium transporter kup | E5E93_22005 | Not Available | Negative | 4530854 - 4532722 | 69298.3 |
| hypothetical protein | E5E93_22010 | Not Available | Positive | 4532945 - 4533713 | 29398.4 |
| type 1 fimbrial protein subunit fima | E5E93_22015 | Not Available | Negative | 4533714 - 4533777 | 1961.45 |
| metal abc transporter substrate-binding lipoprotein/fibrin-binding adhesin fima | E5E93_22020 | Not Available | Positive | 4534348 - 4534896 | 18197.3 |
| type 1 fimbrial protein | E5E93_22025 | Not Available | Positive | 4534961 - 4535500 | 19402.4 |
| type 1 fimbriae chaperone fimc | E5E93_22030 | Not Available | Positive | 4535537 - 4536262 | 26660.5 |
| fimbrial biogenesis outer membrane usher protein | E5E93_22035 | Not Available | Positive | 4536329 - 4538965 | 96654.0 |
| type 1 fimbriae minor subunit fimf | E5E93_22040 | Not Available | Positive | 4538975 - 4539505 | 18716.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





