Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | E5E93_21880 | Not Available | Negative | 4501178 - 4502020 | 31284.3 |
| co2+/mg2+ efflux protein apag | E5E93_21885 | Not Available | Negative | 4502027 - 4502404 | 13867.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | E5E93_21890 | Not Available | Negative | 4502407 - 4503228 | 30422.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | E5E93_21895 | Not Available | Negative | 4503225 - 4504214 | 35210.9 |
| peptidylprolyl isomerase sura | E5E93_21900 | Not Available | Negative | 4504214 - 4505500 | 47286.5 |
| lps assembly protein lptd | E5E93_21905 | Not Available | Negative | 4505553 - 4507922 | 90189.4 |
| co-chaperone djla | E5E93_21910 | Not Available | Positive | 4508178 - 4508993 | 30567.2 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | E5E93_21915 | Not Available | Negative | 4509110 - 4509769 | 24862.1 |
| dna polymerase ii | E5E93_21925 | Not Available | Negative | 4512853 - 4515204 | 90045.6 |
| l-ribulose-5-phosphate 4-epimerase | E5E93_21930 | Not Available | Negative | 4515279 - 4515974 | 25504.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





