Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | E5E93_21780 | Not Available | Positive | 4477071 - 4478021 | 34776.6 |
| ribonucleoside hydrolase rihc | E5E93_21785 | Not Available | Positive | 4478087 - 4479001 | 32547.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | E5E93_21790 | Not Available | Positive | 4479168 - 4479989 | 28731.3 |
| carbamoyl-phosphate synthase small subunit | E5E93_21795 | Not Available | Positive | 4480445 - 4481593 | 41433.4 |
| carbamoyl-phosphate synthase large subunit | E5E93_21800 | Not Available | Positive | 4481611 - 4484721 | 113813.0 |
| carnitine metabolism transcriptional regulator caif | E5E93_21805 | Not Available | Positive | 4485094 - 4485489 | 15393.0 |
| carnitine operon protein caie | E5E93_21810 | Not Available | Negative | 4485575 - 4486165 | 21157.6 |
| crotonobetainyl-coa hydratase | E5E93_21815 | Not Available | Negative | 4486171 - 4486956 | 28175.8 |
| crotonobetaine/carnitine-coa ligase | E5E93_21820 | Not Available | Negative | 4487065 - 4488618 | 58534.3 |
| l-carnitine coa-transferase | E5E93_21825 | Not Available | Negative | 4488692 - 4489909 | 45129.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





