Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3829 domain-containing protein | E5E93_21015 | Not Available | Negative | 4326127 - 4327182 | 39267.3 |
| sulfurtransferase fdhd | E5E93_21020 | Not Available | Negative | 4327335 - 4328168 | 30533.8 |
| formate dehydrogenase-n subunit alpha | E5E93_21025 | Not Available | Positive | 4328362 - 4331412 | 112419.0 |
| formate dehydrogenase subunit beta | E5E93_21030 | Not Available | Positive | 4331425 - 4332327 | 33102.1 |
| formate dehydrogenase cytochrome b556 subunit | E5E93_21035 | Not Available | Positive | 4332324 - 4332959 | 24607.7 |
| formate dehydrogenase accessory protein fdhe | E5E93_21040 | Not Available | Positive | 4332956 - 4333885 | 34708.6 |
| hypothetical protein | E5E93_21045 | Not Available | Negative | 4334215 - 4334457 | 9378.09 |
| copg family transcriptional regulator | E5E93_21050 | Not Available | Negative | 4334674 - 4334892 | 8408.23 |
| hypothetical protein | E5E93_21055 | Not Available | Positive | 4335176 - 4335394 | 8215.83 |
| gnat family n-acetyltransferase | E5E93_21065 | Not Available | Negative | 4337793 - 4338782 | 37096.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





