Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional activator rhar | E5E93_20960 | Not Available | Negative | 4313303 - 4314241 | 35628.3 |
| hth-type transcriptional activator rhas | E5E93_20965 | Not Available | Negative | 4314225 - 4315061 | 32331.2 |
| rhamnulokinase | E5E93_20970 | Not Available | Positive | 4315349 - 4316818 | 54053.2 |
| l-rhamnose isomerase | E5E93_20975 | Not Available | Positive | 4316815 - 4318074 | 47142.9 |
| rhamnulose-1-phosphate aldolase | E5E93_20980 | Not Available | Positive | 4318249 - 4319073 | 30123.1 |
| l-rhamnose mutarotase | E5E93_20985 | Not Available | Positive | 4319083 - 4319397 | 12265.5 |
| porin | E5E93_20990 | Not Available | Negative | 4319438 - 4320832 | 51934.3 |
| pts fructose transporter subunit iia | E5E93_20995 | Not Available | Positive | 4321310 - 4321756 | 16110.5 |
| pts fructose-like transporter subunit iibc | E5E93_21000 | Not Available | Positive | 4321767 - 4323218 | 51123.5 |
| aminopeptidase | E5E93_21005 | Not Available | Positive | 4323208 - 4324278 | 38754.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





