Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf805 domain-containing protein | E5E93_20890 | Not Available | Negative | 4300040 - 4300480 | 16542.6 |
| duf1454 family protein | E5E93_20895 | Not Available | Positive | 4300581 - 4301180 | 21736.1 |
| triose-phosphate isomerase | E5E93_20900 | Not Available | Positive | 4301288 - 4302055 | 26973.3 |
| cdp-diacylglycerol diphosphatase | E5E93_20905 | Not Available | Negative | 4302110 - 4302865 | 28384.2 |
| cation-efflux pump fief | E5E93_20920 | Not Available | Negative | 4305423 - 4306325 | 32929.2 |
| envelope stress response regulator transcription factor cpxr | E5E93_20930 | Not Available | Positive | 4307125 - 4307823 | 26313.7 |
| envelope stress sensor histidine kinase cpxa | E5E93_20935 | Not Available | Positive | 4307820 - 4309193 | 51627.3 |
| 2-keto-3-deoxygluconate transporter | E5E93_20945 | Not Available | Negative | 4310123 - 4311088 | 33005.5 |
| superoxide dismutase | E5E93_20950 | Not Available | Negative | 4311367 - 4311987 | 23080.2 |
| l-rhamnose/proton symporter rhat | E5E93_20955 | Not Available | Positive | 4312272 - 4313306 | 37301.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





