Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoate--protein ligase lpla | E5E93_20625 | Not Available | Positive | 4236746 - 4237762 | 37912.8 |
| purine-nucleoside phosphorylase | E5E93_20630 | Not Available | Negative | 4238218 - 4238937 | 25951.4 |
| phosphopentomutase | E5E93_20635 | Not Available | Negative | 4239017 - 4240240 | 44372.4 |
| thymidine phosphorylase | E5E93_20640 | Not Available | Negative | 4240292 - 4241614 | 47182.9 |
| deoxyribose-phosphate aldolase | E5E93_20645 | Not Available | Negative | 4241741 - 4242520 | 27735.3 |
| yjji family glycine radical enzyme | E5E93_20650 | Not Available | Positive | 4242778 - 4244328 | 58036.4 |
| yjjw family glycine radical enzyme activase | E5E93_20655 | Not Available | Positive | 4244300 - 4245163 | 31523.3 |
| glutamate racemase | E5E93_20665 | Not Available | Negative | 4246504 - 4247361 | 31133.8 |
| tonb-dependent vitamin b12 receptor btub | E5E93_20670 | Not Available | Negative | 4247306 - 4249150 | 68409.7 |
| trna (uridine(54)-c5)-methyltransferase trma | E5E93_20675 | Not Available | Positive | 4249519 - 4250619 | 41969.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





