Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | E4223 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1196697 bp
Thymine Count
1191172 bp
Guanine Count
1229268 bp
Cytosine Count
1234068 bp
Genome Length
4851238 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
299 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mdr efflux pump acrab transcriptional activator roba | E5E93_20575 | Not Available | Positive | 4225554 - 4226423 | 33146.8 |
| phosphoglycerate mutase gpmb | E5E93_20580 | Not Available | Negative | 4226420 - 4227067 | 24066.7 |
| non-canonical purine ntp phosphatase | E5E93_20585 | Not Available | Positive | 4227119 - 4227631 | 18213.7 |
| trp operon repressor | E5E93_20590 | Not Available | Negative | 4227778 - 4228104 | 12355.9 |
| murein transglycosylase | E5E93_20595 | Not Available | Negative | 4228194 - 4230131 | 73388.1 |
| energy-dependent translational throttle protein etta | E5E93_20600 | Not Available | Positive | 4230342 - 4232009 | 62446.5 |
| trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator nadr | E5E93_20605 | Not Available | Negative | 4232316 - 4233548 | 47334.4 |
| dna repair protein rada | E5E93_20610 | Not Available | Negative | 4233569 - 4234951 | 49445.0 |
| phosphoserine phosphatase | E5E93_20615 | Not Available | Negative | 4235000 - 4235968 | 35044.8 |
| ytjb family periplasmic protein | E5E93_20620 | Not Available | Positive | 4236074 - 4236718 | 24084.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





